I’m trying to predict the protein structure of an antibody using AlphaFold, but I’m unsure how to specify the disulfide (SS) bonds to AlphaFold. While I can see the disulfide bonds in the Uniprot features, they are not represented in the Fasta sequence. How can I inform AlphaFold about the placement of these disulfide bonds?
I’m not able to specify the disulphide bonds in the fasta sequence for the alphafold input
New contributor
Vineesh Sriramoju is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.