Replace the fasta headers with sed
I have a fasta file with multiple headers:
`>contig00001_len=155988_cov=17.1_corr=0_origname=NODE_1_length_155988_cov_17.103139_sw=shovill-spades/1.1.0_date=20240120
AATTCTAACAGGTCAGATATTTCTACAATAGCATCGCGAATACCACCAATATA
Bash shell script to replace 3rd word/string to zero if it contains empty
Bash Shell script to replace the third value to zero if it has no value or empty.
values are closed by #^#^, seprated by pipe and records are terminated with new line
My file have so many lines ,so if any record/line of 3rd string/value contains empty or null needs
to be replaced by zero 0.
#^11abc27#^|#^x26729#^|#^#^|#^82.41#^|#^173#^|#^yx Corportaion#^
want change to
#^11abc27#^|#^x26729#^|#^0#^|#^82.41#^|#^173#^|#^yx Corportaion#^
sed + how to avoid adding word before matched line when word already exists
I created the following sed
in order to add the python command – exit()
before the line LIST_ALL_SELECT_TOOL_PACKAGES_CMD
in the file – yumrpm.py
regex to convert an YAML object into string in `sed`
I have an yaml
object like below
sed: copy lines up to and including match, and then add a newline
I have this sed expression:
How do I remove everything behind each @ in a string as long as it does not contain a / in sed?
In sed, how do I remove everything behind each @
in a string, as long as that does not contain a /
?
How do I print all lines from the first line of a file up to and including the first matched line?
How do I print all lines from the first line of a file up to and including the first matched line?
sed to replace digits regex capture group
I use sed to replace digits regex capture group.
How to use d with sed?
This works:
sed to parse compiler warning message
I am trying to use sed to grab file path, line number, compiler warning number and warning message but I am failing.
Remove all but last dots from beggining of line until the first num with sed
I have some text that I need to remove some dots
The file has multiple lines, and I want to change only the ones more or less like these, other lines should be untouched