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Tag Archive for rstudio

R Markdown usage question: How to display plot in R Studio plots window when using R Markdown?

I typically use R Markdown to prepare scripts that I can easily share with my colleagues. In the past, I exported high-quality plots from RStudio using the ‘Export/Save as Image…/Save as SVG’ feature, which seems to be not an option with R Markdown. One aspect I find particularly useful is the ability to dynamically adjust the plot size by dragging the RStudio window, allowing for on-the-spot decisions about the best size for the plot. Could you suggest a method for writing scripts that are not only presentable but also utilize RStudio’s graphical user interface to export plots at the desired size? Also, open to hear about better workflows.

Whatis my line of code not recognizing my data?

Question 8B Perform an appropriate statistical test on your PVC data from the introduction to sampling techniques lab and write a properly formatted results statement. grassland_dat <- data %>% filter(Environment == “Grassland”) %>% select(PVC) riparian_dat <- data %>% filter(Environment == “Riparian”) %>% select (PVC) t_test_result <- t.test(grassland_dat$PVC), riparian_dat$PVC) t_test_result # # Welch two Sample t-test […]

R Session Aborted

I am running the code, but there have been frequent R crash reconstruction tasks recently.
Any help in resolving these errors is much appreciated.

I plotting the residuals of test set in r. But when i Plot the length of residuals and predictions are different despite of same dataset

> # Make predictions on the test set > predictions_test <- predict(pmlr_model_no_outliers, newdata = temiller_extr_aug) > # Calculate residuals of the test set > residuals_test <- residuals(pmlr_model_no_outliers, newdata = temiller_extr_aug) > # Check the lengths of predictions and residuals > length(predictions_test) [1] 29 > length(residuals_test) [1] 66 I provide the console output of code that […]

Stat_ellipse shows an incomplete ellipse

I am making a PLS-DA plot in Rstudio, and wanted to show an ellipse around each group.
Previously my code worked fine, but today when I rerun the code, the ellipse around 1 of my groups looks incomplete. Does anyone know why that happened (even though it worked fine previously). I dont get warnings from R.

How to count non-zero, non-NA values in dataframe

So my question is a bit like the one posted here: Count the number of non-zero elements of each column, but I also have NAs in my dataframe. I want to count the number of non-zero, non-NaN values in each column .

how can I plot a quantile curve?

How draw the quartile curve in the image (Quantile curve).I’m running the code but it’s giving me errors. > plot(NULL,NULL,xlim=dt,ylim=c(min(Q1),max(Q3)), + xlab=”lambda”,ylab=”reflectance”) Error in plot.window(…) : invalid ‘xlim’ value > lines(lambda,colMeans(ts),lwd=2,col=”blue”) Error in colMeans(ts) : ‘x’ must be an array of at least two dimensionst` Quantile curve](https://i.sstatic.net/JpjUsMW2.jpg) library(zoo) `x <- c(0.231,0.186,0.163,0.167,0.2,0.232,0.252, 0.268,0.272,0.273,0.269,0.255,0.224,0.181,0.162) dt <- seq(as.Date(“1995-01-01”), […]