Relative Content

Tag Archive for random-forestsurvival-analysisshap

Is there a R function to use SHAP with the result of rfsrc

I am using rfsrc in Rstudio to run my bioinformatics data (included survival status and time), and I developed my competing risks model. Although I have generated my result with nested cross validation (manually). I got the VIP value, but I am wondering is there a way to figure out the direction of the interaction between these variables. My basic code is here: rfsrc(Surv(time, status) ~ ., data = x) And my competing risks analysis basically have 3 outcomes, so I have 3 different predictions for each outcome.