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Tag Archive for pythontclvmd

Is there a way to use tcl to customize and isolate selected atoms in VMD?

I am attempting to write a script that isolates beads of a certain name and adjusts their draw style before running the trajectory animation and taking a snapshot of the final configuration. the snapshot is no issue but i cannot figure out how to change my representation in the way i can with the normal interface. I just want to set the representation selection to “name A B C and z>0” and change draw style to VDW before taking the snapshot.