The aim of this question is to know how the code the plots which is related with the codes.
As I described in the Title , I have an old code that has an article .
I updated the code but when I ran it in the Google colab , the results was not as same as the charts in the article.
I will be appreciated if anybody can help

I’m working with the piecewiseSEM package in R to analyze structural equation models (SEM) and I want to create a plot where the size of the edges is proportional to the effects (Estimate) of each variable in the pSEM results. Here’s a reproducible example of data and equations:

I’m trying make this kind of plot, metagene plot? Can anyone help me how to plot this figure or what software or package can do this? Really appiciate your help!!