How to create a heatmap from the output of GSEA clusterProfiler?
I am running a GSEA analysis of differential expression of a deep sequencing RNA dataset, using the ClusterProfiler package in R.
stat_density2d_filled throwing error when used with scale_fill_gradient
I am trying to produce a heat map based on point locations using stat_density2d_filled. Using stat_density2d results in ugly artifacts. stat_density2d works well with scale_fill_gradient, but when trying the same things with stat_density2d_filled I get an error: “Error: Discrete value supplied to continuous scale”.