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Tag Archive for bioinformatics

Error with BiocParallel. No barcodes files found

I am currently trying to implement a pipeline using SingleCellExperiment and DropletUtils in R. I have been getting an error for while now and I have tired everything to fix it, but nothing works. This is the code I a, currently running.

How to search primers with primerTree within a specific taxa?

I’m trying to develop an eDNA metabarcoding assay and I’m searching using the r package primerTree to search universal fish primer pairs. When I search I don’t want to search for all organisms that have a sequence that works. I want to search only within a specific genus. Does anyone know how to do this?