After upgrading Sphinx from 2.4.5 to 3.0.0 Latex output is broken for me. I get lots of errors of the following type:

! LaTeX Error: Command appendix undefined.

! LaTeX Error: The font size command normalsize is not defined: there is probably something wrong with the class file.

My class file worked fine in 2.4.5. I’ve tried to find what changed between 2.4.5 -> 3.0.0 to see what I need to update on my side, but I can’t find enough clues.

I’m on Windows and Python 3.12.

Running sphinx-build latexpdf does produce a PDF that lacks all elements mentioned in the errors (for example font sizes are wrong). Resulting logfile below (omitted ~half of the log to conform with body text limit):

This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdflatex 2023.9.26)  19 AUG 2024 22:30
entering extended mode
 restricted write18 enabled.
 %&-line parsing enabled.
**test_doc.tex
(./test_doc.tex
LaTeX2e <2023-06-01> patch level 1
L3 programming layer <2023-08-29>
(./standard_without_version.cls
Document Class: standard_without_version 2019/12/01 v2.3.0 Document class (Sphi
nx manual)
LaTeX Info: Redefining and on input line 35.
) (c:/texlive/2023/texmf-dist/tex/latex/base/inputenc.sty
Package: inputenc 2021/02/14 v1.3d Input encoding file
inpenc@prehook=toks17
inpenc@posthook=toks18
)
   defining Unicode char U+00A0 (decimal 160)
   defining Unicode char U+2500 (decimal 9472)
   defining Unicode char U+2502 (decimal 9474)
   defining Unicode char U+2514 (decimal 9492)
   defining Unicode char U+251C (decimal 9500)
   defining Unicode char U+2572 (decimal 9586)

(c:/texlive/2023/texmf-dist/tex/latex/cmap/cmap.sty
Package: cmap 2021/02/06 v1.0j CMap support: searchable PDF
)
(c:/texlive/2023/texmf-dist/tex/latex/base/fontenc.sty
Package: fontenc 2021/04/29 v2.0v Standard LaTeX package
<<t1.cmap>>)
(c:/texlive/2023/texmf-dist/tex/latex/amsmath/amsmath.sty
Package: amsmath 2023/05/13 v2.17o AMS math features
@mathmargin=skip48

For additional information on amsmath, use the `?' option.
(c:/texlive/2023/texmf-dist/tex/latex/amsmath/amstext.sty
Package: amstext 2021/08/26 v2.01 AMS text

(c:/texlive/2023/texmf-dist/tex/latex/amsmath/amsgen.sty
File: amsgen.sty 1999/11/30 v2.0 generic functions
@emptytoks=toks19
ex@=dimen140
))
(c:/texlive/2023/texmf-dist/tex/latex/amsmath/amsbsy.sty
Package: amsbsy 1999/11/29 v1.2d Bold Symbols
pmbraise@=dimen141
)
(c:/texlive/2023/texmf-dist/tex/latex/amsmath/amsopn.sty
Package: amsopn 2022/04/08 v2.04 operator names
)
inf@bad=count185
LaTeX Info: Redefining frac on input line 234.
uproot@=count186
leftroot@=count187
LaTeX Info: Redefining overline on input line 399.
LaTeX Info: Redefining colon on input line 410.
classnum@=count188
DOTSCASE@=count189
LaTeX Info: Redefining ldots on input line 496.
LaTeX Info: Redefining dots on input line 499.
LaTeX Info: Redefining cdots on input line 620.
Mathstrutbox@=box51
strutbox@=box52
LaTeX Info: Redefining big on input line 722.
LaTeX Info: Redefining Big on input line 723.
LaTeX Info: Redefining bigg on input line 724.
LaTeX Info: Redefining Bigg on input line 725.
big@size=dimen142
LaTeX Font Info:    Redeclaring font encoding OML on input line 743.
LaTeX Font Info:    Redeclaring font encoding OMS on input line 744.
macc@depth=count190
LaTeX Info: Redefining bmod on input line 905.
LaTeX Info: Redefining pmod on input line 910.
LaTeX Info: Redefining smash on input line 940.
LaTeX Info: Redefining relbar on input line 970.
LaTeX Info: Redefining Relbar on input line 971.
c@MaxMatrixCols=count191
dotsspace@=muskip16
c@parentequation=count192
dspbrk@lvl=count193
tag@help=toks20
row@=count194
column@=count195
maxfields@=count196
andhelp@=toks21
eqnshift@=dimen143
alignsep@=dimen144
tagshift@=dimen145
tagwidth@=dimen146
totwidth@=dimen147
lineht@=dimen148
@envbody=toks22
multlinegap=skip49
multlinetaggap=skip50
mathdisplay@stack=toks23
LaTeX Info: Redefining [ on input line 2953.
LaTeX Info: Redefining ] on input line 2954.
)
(c:/texlive/2023/texmf-dist/tex/latex/amsfonts/amssymb.sty
Package: amssymb 2013/01/14 v3.01 AMS font symbols

(c:/texlive/2023/texmf-dist/tex/latex/amsfonts/amsfonts.sty
Package: amsfonts 2013/01/14 v3.01 Basic AMSFonts support
symAMSa=mathgroup4
symAMSb=mathgroup5
LaTeX Font Info:    Redeclaring math symbol hbar on input line 98.
LaTeX Font Info:    Overwriting math alphabet `mathfrak' in version `bold'
(Font)                  U/euf/m/n --> U/euf/b/n on input line 106.
))
(c:/texlive/2023/texmf-dist/tex/generic/babel/babel.sty
Package: babel 2023/09/12 v3.94 The Babel package
babel@savecnt=count197
U@D=dimen149
l@unhyphenated=language89

(c:/texlive/2023/texmf-dist/tex/generic/babel/txtbabel.def)
bbl@readstream=read2
bbl@dirlevel=count198

(c:/texlive/2023/texmf-dist/tex/generic/babel-english/english.ldf
Language: english 2017/06/06 v3.3r English support from the babel system
Package babel Info: Hyphen rules for 'canadian' set to l@english
(babel)             (language0). Reported on input line 102.
Package babel Info: Hyphen rules for 'australian' set to l@ukenglish
(babel)             (language23). Reported on input line 105.
Package babel Info: Hyphen rules for 'newzealand' set to l@ukenglish
(babel)             (language23). Reported on input line 108.
))
(c:/texlive/2023/texmf-dist/tex/generic/babel/locale/en/babel-english.tex
Package babel Info: Importing font and identification data for english
(babel)             from babel-en.ini. Reported on input line 11.
)
(c:/texlive/2023/texmf-dist/tex/latex/psnfss/times.sty
Package: times 2020/03/25 PSNFSS-v9.3 (SPQR)
)
(c:/texlive/2023/texmf-dist/tex/latex/fncychap/fncychap.sty
Package: fncychap 2007/07/30 v1.34 LaTeX package (Revised chapters)


! LaTeX Error: Command appendix undefined.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.110 renewcommandappendix
                            {par
?
RW=skip51
mylen=skip52
myhi=skip53
px=skip54
py=skip55
pyy=skip56
pxx=skip57
c@AlphaCnt=count199
c@AlphaDecCnt=count266
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Package: sphinx 2019/09/02 v2.3.0 LaTeX package (Sphinx markup)
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Package: ltxcmds 2020-05-10 v1.25 LaTeX kernel commands for general use (HO)
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Package: graphicx 2021/09/16 v1.2d Enhanced LaTeX Graphics (DPC,SPQR)

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Package: keyval 2022/05/29 v1.15 key=value parser (DPC)
KV@toks@=toks24
)
(c:/texlive/2023/texmf-dist/tex/latex/graphics/graphics.sty
Package: graphics 2022/03/10 v1.4e Standard LaTeX Graphics (DPC,SPQR)

(c:/texlive/2023/texmf-dist/tex/latex/graphics/trig.sty
Package: trig 2021/08/11 v1.11 sin cos tan (DPC)
)
(c:/texlive/2023/texmf-dist/tex/latex/graphics-cfg/graphics.cfg
File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration
)
Package graphics Info: Driver file: pdftex.def on input line 107.

(c:/texlive/2023/texmf-dist/tex/latex/graphics-def/pdftex.def
File: pdftex.def 2022/09/22 v1.2b Graphics/color driver for pdftex
))
Gin@req@height=dimen150
Gin@req@width=dimen151
)
(c:/texlive/2023/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty
Package: fancyhdr 2022/11/09 v4.1 Extensive control of page headers and footers

f@nch@headwidth=skip58
f@nch@O@elh=skip59
f@nch@O@erh=skip60
f@nch@O@olh=skip61
f@nch@O@orh=skip62
f@nch@O@elf=skip63
f@nch@O@erf=skip64
f@nch@O@olf=skip65
f@nch@O@orf=skip66
)
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Package: textcomp 2020/02/02 v2.0n Standard LaTeX package
)
(c:/texlive/2023/texmf-dist/tex/latex/titlesec/titlesec.sty
Package: titlesec 2021/07/05 v2.14 Sectioning titles
ttl@box=box53
beforetitleunit=skip67
aftertitleunit=skip68
ttl@plus=dimen152
ttl@minus=dimen153
ttl@toksa=toks25
titlewidth=dimen154
titlewidthlast=dimen155
titlewidthfirst=dimen156


Package titlesec Warning: Non standard sectioning command section
(titlesec)                detected. Using default spacing and no format.


Package titlesec Warning: Non standard sectioning command subsection
(titlesec)                detected. Using default spacing and no format.


Package titlesec Warning: Non standard sectioning command subsubsection
(titlesec)                detected. Using default spacing and no format.


Package titlesec Warning: Non standard sectioning command paragraph
(titlesec)                detected. Using default spacing and no format.


Package titlesec Warning: Non standard sectioning command subparagraph
(titlesec)                detected. Using default spacing and no format.

) (c:/texlive/2023/texmf-dist/tex/latex/tabulary/tabulary.sty
Package: tabulary 2014/06/11 v0.10 tabulary package (DPC)

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Package: array 2022/09/04 v2.5g Tabular extension package (FMi)
col@sep=dimen157
ar@mcellbox=box54
extrarowheight=dimen158
NC@list=toks26
extratabsurround=skip69
backup@length=skip70
ar@cellbox=box55
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TY@count=count267
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tymin=dimen160
tymax=dimen161
TY@tablewidth=dimen162
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Package: longtable 2021-09-01 v4.17 Multi-page Table package (DPC)
LTleft=skip71
LTright=skip72
LTpre=skip73
LTpost=skip74
LTchunksize=count268
LTcapwidth=dimen163
LT@head=box56
LT@firsthead=box57
LT@foot=box58
LT@lastfoot=box59
LT@gbox=box60
LT@cols=count269
LT@rows=count270
c@LT@tables=count271
c@LT@chunks=count272
c@table=count273
LT@p@ftn=toks27
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(c:/texlive/2023/texmf-dist/tex/latex/varwidth/varwidth.sty
Package: varwidth 2009/03/30 ver 0.92;  Variable-width minipages
@vwid@box=box61
sift@deathcycles=count274
@vwid@loff=dimen164
@vwid@roff=dimen165
)
(./sphinxmulticell.sty
Package: sphinxmulticell 2017/02/23 v1.6 better span rows and columns of a tabl
e (Sphinx team)
sphinx@TY@tablewidth=dimen166
) (c:/texlive/2023/texmf-dist/tex/latex/base/makeidx.sty
Package: makeidx 2021/10/04 v1.0m Standard LaTeX package
) (c:/texlive/2023/texmf-dist/tex/latex/framed/framed.sty
Package: framed 2011/10/22 v 0.96: framed or shaded text with page breaks
OuterFrameSep=skip75
fb@frw=dimen167
fb@frh=dimen168
FrameRule=dimen169
FrameSep=dimen170
)
(c:/texlive/2023/texmf-dist/tex/latex/xcolor/xcolor.sty
Package: xcolor 2022/06/12 v2.14 LaTeX color extensions (UK)

(c:/texlive/2023/texmf-dist/tex/latex/graphics-cfg/color.cfg
File: color.cfg 2016/01/02 v1.6 sample color configuration
)
Package xcolor Info: Driver file: pdftex.def on input line 227.

(c:/texlive/2023/texmf-dist/tex/latex/graphics/mathcolor.ltx)
Package xcolor Info: Model `cmy' substituted by `cmy0' on input line 1353.
Package xcolor Info: Model `hsb' substituted by `rgb' on input line 1357.
Package xcolor Info: Model `RGB' extended on input line 1369.
Package xcolor Info: Model `HTML' substituted by `rgb' on input line 1371.
Package xcolor Info: Model `Hsb' substituted by `hsb' on input line 1372.
Package xcolor Info: Model `tHsb' substituted by `hsb' on input line 1373.
Package xcolor Info: Model `HSB' substituted by `hsb' on input line 1374.
Package xcolor Info: Model `Gray' substituted by `gray' on input line 1375.
Package xcolor Info: Model `wave' substituted by `hsb' on input line 1376.
)
(c:/texlive/2023/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty
Package: fancyvrb 2023/01/19 4.5a verbatim text (tvz,hv)
FV@CodeLineNo=count275
FV@InFile=read3
FV@TabBox=box62
c@FancyVerbLine=count276
FV@StepNumber=count277
FV@OutFile=write3
)
(./footnotehyper-sphinx.sty
Package: footnotehyper-sphinx 2017/10/27 v1.7 hyperref aware footnote.sty for s
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FNH@notes=box63
FNH@width=dimen171
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float@exts=toks28
float@box=box64
@float@everytoks=toks29
@floatcapt=box65
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(c:/texlive/2023/texmf-dist/tex/latex/wrapfig/wrapfig.sty
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WF@everypar=toks30
Package: wrapfig 2003/01/31  v 3.6
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(c:/texlive/2023/texmf-dist/tex/latex/parskip/parskip.sty
Rollback for package 'parskip' requested -> version 'v1'.
         This corresponds to the release introduced on 2001-04-09.

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Package: parskip 2001/04/09 non-zero parskip adjustments
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Package: alltt 2021/01/29 v2.0g defines alltt environment
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Package: capt-of 2009/12/29 v0.2 standard captions outside of floats
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Package: needspace 2010/09/12 v1.3d reserve vertical space
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(./sphinxhighlight.sty
Package: sphinxhighlight 2016/05/29 stylesheet for highlighting with pygments
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Package: kvoptions 2022-06-15 v3.15 Key value format for package options (HO)

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Package: kvsetkeys 2022-10-05 v1.19 Key value parser (HO)
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sphinxverbatimsep=dimen174
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sphinxshadowsep=dimen176
sphinxshadowsize=dimen177
sphinxshadowrule=dimen178
spx@notice@border=dimen179
spx@image@maxheight=dimen180
spx@image@box=dimen181
c@literalblock=count280
sphinxcontinuationbox=box67
sphinxvisiblespacebox=box68
sphinxVerbatim@TitleBox=box69
sphinxVerbatim@ContentsBox=box70
py@argswidth=skip76
lineblockindentation=skip77
DUlineblockindent=skip78
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Package: geometry 2020/01/02 v5.9 Page Geometry

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Package: ifvtex 2019/10/25 v1.7 ifvtex legacy package. Use iftex instead.

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Gm@cnth=count281
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LaTeX Font Info:    Trying to load font information for T1+ptm on input line 14
4.

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l__color_backend_stack_int=count296
l__pdf_internal_box=box71
)
(./test_doc.aux)
openout1 = `test_doc.aux'.

LaTeX Font Info:    Checking defaults for OML/cmm/m/it on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for OMS/cmsy/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for OT1/cmr/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for T1/cmr/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for TS1/cmr/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for OMX/cmex/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for U/cmr/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for PD1/pdf/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.
LaTeX Font Info:    Checking defaults for PU/pdf/m/n on input line 144.
LaTeX Font Info:    ... okay on input line 144.


! LaTeX Error: The font size command normalsize is not defined:
               there is probably something wrong with the class file.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.144 begin{document}

?
(c:/texlive/2023/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
scratchcounter=count297
scratchdimen=dimen194
scratchbox=box72
nofMPsegments=count298
nofMParguments=count299
everyMPshowfont=toks33
MPscratchCnt=count300
MPscratchDim=dimen195
MPnumerator=count301
makeMPintoPDFobject=count302
everyMPtoPDFconversion=toks34
) (c:/texlive/2023/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
Package: epstopdf-base 2020-01-24 v2.11 Base part for package epstopdf
Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4
85.

(c:/texlive/2023/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg
File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv
e
))
! Undefined control sequence.
__hook begindocument ...check@a FNH@@makefntext
                                                  {1.2!3?4,}FNH@@@ 1.2!3?4,...
l.144 begin{document}

?

Package footnotehyper-sphinx Warning: Footnotes will be sub-optimal, sorry. Thi
s is due to the document class or
 some package modifying macro @makefntext.
 You can try to report this incompatibility at
 https://github.com/sphinx-doc/sphinx with this info:.

undefined
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
*geometry* verbose mode - [ preamble ] result:
* driver: pdftex
* paper: a4paper
* layout: <same size as paper>
* layoutoffset:(h,v)=(0.0pt,0.0pt)
* modes:
* h-part:(L,W,R)=(72.26999pt, 452.9679pt, 72.26999pt)
* v-part:(T,H,B)=(72.26999pt, 700.50687pt, 72.26999pt)
* paperwidth=597.50787pt
* paperheight=845.04684pt
* textwidth=452.9679pt
* textheight=700.50687pt
* oddsidemargin=0.0pt
* evensidemargin=0.0pt
* topmargin=0.0pt
* headheight=0.0pt
* headsep=0.0pt
* topskip=10.0pt
* footskip=0.0pt
* marginparwidth=36.135pt
* marginparsep=0.0pt
* columnsep=0.0pt
* skipfootins=12.0pt plus 4.0pt minus 4.0pt
* hoffset=0.0pt
* voffset=0.0pt
* mag=1000
* @twocolumnfalse
* @twosidefalse
* @mparswitchfalse
* @reversemarginfalse
* (1in=72.27pt=25.4mm, 1cm=28.453pt)

Package hyperref Info: Link coloring ON on input line 144.
@outlinefile=write4
openout4 = `test_doc.out'.

Package hyperref Info: Option `pageanchor' set `false' on input line 152.

! LaTeX Error: Environment titlepage undefined.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.152 sphinxmaketitle

?
<pdf-cover-logo.png, id=5, 3985.89125pt x 501.875pt>
LaTeX Font Info:    Trying to load font information for T1+pcr on input line 15
2.
(c:/texlive/2023/texmf-dist/tex/latex/psnfss/t1pcr.fd
File: t1pcr.fd 2001/06/04 font definitions for T1/pcr.
)
File: pdf-cover-logo.png Graphic file (type png)
<use pdf-cover-logo.png>
Package pdftex.def Info: pdf-cover-logo.png  used on input line 152.
(pdftex.def)             Requested size: 452.9245pt x 57.029pt.
LaTeX Font Info:    Trying to load font information for T1+phv on input line 15
2.

(c:/texlive/2023/texmf-dist/tex/latex/psnfss/t1phv.fd
File: t1phv.fd 2020/03/25 scalable font definitions for T1/phv.
)
! Undefined control sequence.
sphinxmaketitle ...ight}py@HeaderFamily {LARGE
                                                  MakeUppercase {@title } ...
l.152 sphinxmaketitle

?
! Undefined control sequence.
sphinxmaketitle ... par } vfill vfill {LARGE
                                                  @author par } {normalsi...
l.152 sphinxmaketitle

?

! LaTeX Error: The font size command normalsize is not defined:
               there is probably something wrong with the class file.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.152 sphinxmaketitle

?
! Undefined control sequence.
sphinxmaketitle ... par } vfill vfill {large
                                                  @date par vfill py@aut...
l.152 sphinxmaketitle

?

! LaTeX Error: begin{document} ended by end{titlepage}.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.152 sphinxmaketitle

?

! LaTeX Error: The font size command normalsize is not defined:
               there is probably something wrong with the class file.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.152 sphinxmaketitle

?
[1{c:/texlive/2023/texmf-var/fonts/map/pdftex/updmap/pdftex.map}{c:/texlive/202
3/texmf-dist/fonts/enc/dvips/base/8r.enc} <./pdf-cover-logo.png>]
! Undefined control sequence.
licensepage -> pagestyle {plain} {Huge
                                          Copyright Notice and Disclaimer p...
l.155 licensepage

?

! LaTeX Error: The font size command normalsize is not defined:
               there is probably something wrong with the class file.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...

l.155 licensepage

?

Package fancyhdr Warning: footskip is too small (0.0pt):
(fancyhdr)                Make it at least 10.07997pt, for example:
(fancyhdr)                setlength{footskip}{10.07997pt}.

[11 <./T34.png>]

Package longtable Warning: Table widths have changed. Rerun LaTeX.

(./test_doc.aux)
 ***********
LaTeX2e <2023-06-01> patch level 1
L3 programming layer <2023-08-29>
 ***********


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.


Package rerunfilecheck Warning: File `test_doc.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.

Package rerunfilecheck Info: Checksums for `test_doc.out':
(rerunfilecheck)             Before: <no file>
(rerunfilecheck)             After:  60512455825556B63F144F9EA1EB26AF;3279.
 )
Here is how much of TeX's memory you used:
 14433 strings out of 474927
 226576 string characters out of 5763541
 1946785 words of memory out of 5000000
 35687 multiletter control sequences out of 15000+600000
 572611 words of font info for 56 fonts, out of 8000000 for 9000
 1142 hyphenation exceptions out of 8191
 72i,11n,79p,513b,554s stack positions out of 10000i,1000n,20000p,200000b,200000s
<c:/texlive/2023/texmf-dist/fonts/type1/urw/courier/ucrr8a.pfb><c:/texlive/20
23/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><c:/texlive/2023/texmf-dist/f
onts/type1/urw/helvetic/uhvr8a.pfb><c:/texlive/2023/texmf-dist/fonts/type1/urw/
times/utmb8a.pfb><c:/texlive/2023/texmf-dist/fonts/type1/urw/times/utmr8a.pfb>
Output written on test_doc.pdf (13 pages, 4614463 bytes).
PDF statistics:
 121 PDF objects out of 1000 (max. 8388607)
 81 compressed objects within 1 object stream
 25 named destinations out of 1000 (max. 500000)
 61 words of extra memory for PDF output out of 10000 (max. 10000000)